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Chromosome unknown

From left to right : anchor (genetic markers used for YAC landing), chromosome number, genetic distance (cM), EST (cDNA), DDBJ accessions of the EST clones (Forward and/or reverse sequences), positive YACs, primer, amplified PCR band size, annealing temperature (Ann T) and primer sequences (5' and 3' primers, each 20 bases) are shown.
AnchorChrcMEST Clone (sites)DDBJ Acc (FW)DDBJ Acc (FW)DDBJ Acc (RV)DDBJ Acc (RV)Positive YACsPCP primer Amplified band size (kb)Ann T (C)5'-primer sequence3'-primer sequence

UN
E50150AU058206AU101468Y1163 Y4686CP017130.22
5' GTG ATC CAC TAA TGG AAA CG 3'5' TCA ACA AAC ATG CAT CAC CC 3'

UN
E60992AU031148AU095268Y1163 Y4686CP027150.2
5' TAA TGA TAT CCA CTT CTC GG 3'5' TAG GCA TGG AAA AAA CAG AG 3'

UN
S13759D47948AU032706Y1163 Y4686CP045870.18
5' ACA GGG AGG ATA CGG TGG TC 3'5' TTG AAC TGG GAG GAG CAG TG 3'

UN
E2714AU076043AU076044Y1163 Y4686CP063810.21
5' CTC CGA CAC GCT CTC TCT TC 3'5' TCA TCA GTC TGT GGG TGT TG 3'

UN
C52341C93484AU085754Y1163 Y4686CP067630.22
5' GCT TTG CCT CTT GCT GCT TC 3'5' CTT ACC TTG GCA CGA AAA TG 3'

UN
S14483D48337AU096622Y1163 Y4686CP074230.5*
5' CGG GAG AAA ACT GAT TGG TG 3'5' GGA GAT GAT TCG CCG GTT AG 3'

UN
C61726C28594AU093034Y1163 Y4686CP078800.19
5' TGA ATA TAG GCG TCC AAT CC 3'5' ACT GAT GAT GAA GCT GCT GG 3'

UN
E0439C71837AU098315Y4686CP033050.22
5' GAG GCC AAG GTG GAA GAG AG 3'5' TTT CTT CAT CGA GCC ATT TG 3'

UN
C30037AU108654AU068365Y4686CP003210.22
5' CAA ACC TCA CTC GAA GGC CC 3'5' TGT AGC TCA GTT CGC ACC AC 3'

UN
E11955AU069909
Y5463CP006190.18
5' GAT GTG ACG AAT TCA TGG AC 3'5' GAT GCA GAA ACG TAG CAA TG 3'

UN
E60077AU162311AU030664Y5463CP024260.19
5' GGA AAG GAC AAT GGG AAA GG 3'5' CTT GCA CAG GGA ATG AAA CG 3'

UN
E61644AU102205
Y5463CP039170.26
5' ATC ATC TGC ACG CTC AAC TC 3'5' GAA ACC GGA CAA ATA ATC CC 3'

UN
S21684AU057688
Y5463CP044390.17
5' ATG ATG CCT GAT CGA TCT TC 3'5' GTT GAC TTG ACC CTG AAG CG 3'

UN
C12105C26323AU100698Y5463CP059970.24
5' TTA TAG GCG AGG GAA CAA GC 3'5' CGT TTT CGG TTC ACT TGT TC 3'

UN
E2550C72958AU101205Y5463CP063800.21
5' GAT GGA GGG AAT GAT TTT AC 3'5' TCT AGC ATC GAA GGA GTA CG 3'

UN
E50830AU030264AU030265Y5463CP064760.21
5' AAG AAG ATG CAA GGT GTA GC 3'5' ACC ACG TAC TCC ATT AAC TC 3'

UN
R0622D23942AU082154Y5463CP072890.22555' CCA ACG TGC TCA ACC TGC TG 3'5' AGG GCA GGT GAA GTC GGA GG 3'

UN
C61273C28485AU092985Y5463CP078620.25
5' TCG GAT GCC AAA CAA GAC AC 3'5' GAT ACG CGT TTC ATT CCC TG 3'

UN
C0646
D22632Y5463CP079500.2
5' TGC ATA TGA TTC AGT CCA CG 3'5' GGA CCG ATG GAT CGA ACA AG 3'

UN
S14247D48172AU101789Y5463CP014700.19
5' CCA CCT ACC ATT TTT CAT CG 3'5' CAG CTA TTG AGC TAA CCG AC 3'

UN
E11443
C99402Y5463CP005890.2
5' GCT GCT CCA TTC TAC TTC AC 3'5' CGT GGA ACT GAA TCA TAT GC 3'

UN
C61294
C97672Y4862CP008500.19
5' TTG GGA ATC TCC TGC TTC TG 3'5' TGC ATT TGG AAA GGC TCA AC 3'

UN
C10828AU067902AU067901Y4862CP059570.19
5' TCC TTT TTC CTG GTT ACG AC 3'5' TGG CAT GAT CCA ATT AAT CC 3'

UN
S16193C24924AU089808Y4862CP074770.17
5' TGC TGC CAG TCT GCC TGC TC 3'5' CTT GCT TCG TCG CGC TCA TC 3'

UN
E61274
AU031280Y4862CP027830.2
5' GAG TTA GTC GTG GGA TGC AG 3'5' ATA ACA AGC AGC CAA ATG AG 3'

UN
S3649D41275AU097650Y4862CP088690.17*
5' GGT TCT TGC CTG GTG CCT TG 3'5' CAG GTC ACA GCA GCG AAA GC 3'

UN
E51221AU058440
Y4862CP037900.16
5' GCT GGA GAA GGA CTA CGA GG 3'5' AGA TAG AAG CCC ACA CGG AC 3'

UN
E51082AU095060AU030454Y4862CP037830.21
5' ACG CCC AGC CTG TAA ACA TC 3'5' TCT CAG CCA CAA ATC CAA AC 3'

UN
E0710AU162176
Y3318CP033230.17
5' TAC CCC TCC ATG TTC AAC TC 3'5' CTT TTG CCG GAC TTG ATA CC 3'

UN
E1450C72335AU093965Y3318CP056490.21
5' GGT ATG AAA ATG GGA GAT GG 3'5' AGA TGA TTT TTG CAG GCA GG 3'

UN
E51052
AU030435Y3318CP019040.21
5' CTC CAC TTC AAG ATC AAG CC 3'5' GAG TAA CGA GCA CCC AAA GC 3'

UN
S20375AU056205AU056206Y2005CP021740.21
5' GAA CAG GTG GTG TTG CCA AG 3'5' AAG GAT GCA TTC CAT TCT TC 3'

UN
E60831AU065227AU101504Y1661CP026720.22
5' CCA TGG ACA TCC AGG AGG AG 3'5' AGC AGC AGC AGA TTA AAG CC 3'

UN
R10095AU070692
Y1661CP089660.28
5' CAG AAT TGC ACA TGC GAC CC 3'5' CAT GAC AAT CTC CAC GGC AC 3'

UN
E31005AU094738AU029490Y1661CP053130.25
5' CTA TTT CCC GGT TTC GCA TC 3'5' AGG TAT CAG AGG GCA GCA GC 3'

UN
S11467AU065810AU088661Y1661CP065710.2
5' GAA ACA ACT GGG GAT AAA GC 3'5' GAT TAG CGC CAC TCT TTC AG 3'

UN
S21317AU057293
Y1661CP043470.24
5' TGC CGA ATA CGC CTA AGA TG 3'5' TTG CCT CTC TTT ATT CAC CC 3'

UN
C10658C96765C96766Y6459CP048170.19
5' CGA AGT ATG GCT CAA CAA CG 3'5' AAA TTC TCG GCC TGC ATA AG 3'

UN
S14406D48274AU096598Y5814CP066120.24
5' AAT AAT TTG TCG TCG AGC TG 3'5' AAT TTG GAC ATA CGC ACA CG 3'

UN
S14403D48272C22637Y2418CP000320.24
5' CAG ACA TAC TCA GGA CGT GC 3'5' AAG GCT GGC TGG TTC ATT GA 3'

UN
R2648D24845AU095480Y2418CP102460.18
5' TGA ACC TCC ACG GGT TTG AG 3'5' AAA CCC TCG TAG GTT CCA GC 3'

UN
E1891C72596AU094025Y2418CP063750.22
5' ATT GAT TTA ACG ACT GCC TC 3'5' TAC AGC CGT ACA GGT TTA AG 3'

UN
S21727AU162775AU057725Y2418CP044500.18
5' ACC CCA GAT TTT AGT GCC AG 3'5' AAT TTG TAT GGC TCG TGG TG 3'

UN
C0396D15278C98027Y2418CP032131.5*
5' ATG GCA GGC CGA AGC ACA TC 3'5' CAG CTT CCC ATT ATA CAC GG 3'

UN
C10146D21986AU092018Y1953 Y2669 Y5703CP010860.27
5' AAT GTC TTC CCC CTT AGC AG 3'5' CAC GAC AAA CTT TGG AGA AC 3'

UN
C52854C27785AU092679Y4954 Y5932 Y6914CP067920.19
5' TAG GGT TTG GGG TTT TTT AG 3'5' TCA TGC AGG CTA CAA GGG TC 3'

UN
S6563AU161977
Y3904 Y3916 Y4758CP047490.23
5' TTG GGT CTG GAA ATG GTT GC 3'5' ATT TCA ATT AGC AGC ATC GG 3'

UN
E61354BAU162347
Y3904 Y3916 Y4758CP084620.2
5' GAC CAA CTC GAT GGG CTA TG 3'5' AAC AAG AAG AGA CCG ATC CG 3'

UN
C53659AU093621AU093622Y3904 Y3916 Y4758CP068370.2
5' CAC CGG CGT CTG AAT GAA TG 3'5' CAA CAC CGC AAA AGC ATA CG 3'

UN
R10508AU162601
Y3904 Y3916 Y4758CP040980.17
5' GCC AGT TAT CCT TAG CTA TC 3'5' ACC ATA ACC AAA GCG AAC TC 3'

UN
R4072AU082732AU082733Y1002 Y2135 Y2139 Y2612 Y6820 Y7067CP058170.28
5' AGT GCT TCC ACA GGG CTA GG 3'5' CAA ACG CAA CCA TTA CAG GC 3'

UN
E0970C72091AU093863Y2139CP055610.2
5' ACG GGT GCA TTG TCG GCT TC 3'5' GTA GCA GGC GAC AAC CAA GC 3'

UN
C60133C97408C97409Y2139CP012370.2(?)
5' GGC CAT TAT AAG AGG ATG TG 3'5' AGT GCT GGA AGT CAC TGA GG 3'

last updated 26 September 2001 RICE GENOME RESEARCH PROGRAM (RGP) HOME PAGE
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